I created a domain name threough godaddy and purchased their template based software. The software does not do alot of things I had wished. Is there a way to delete the webpages I have created and start brand new with something else using the same domain name?

Why can't you just delete the files normally, via your FTP program or File Manager?

I probably can...but then can I use other software other than what I bought from godaddy to create it???

have you contacted Godaddy and let them know this?

use frontpage, very easy to do. Open site -> put your domain -> username and password -->Delete your files.