Just bought cpanel/whm, however I don't understand how to set up my own nameserver with cpanel.... I have two IP's that I can use.

Can anyone point me to some tutorial or explain the process?

Thanks

You may want to reference the section on setting up Nameservers in the WHM Manual under "Logging on for the first time" available at:

http://www.cpanel.net/docs/whm/Logging_on_for_the_first_time.htm